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NGS Analysis

 

 

Analysis of sequencing data (next-generation sequencing)

  • analysis of RNA-, mRNA- lncRNA-data
  • alignment/annotation
  • data normalization (RPM, RPK, RPKM, TMM, ...)
  • algorithms to test for differential expression

contactDanny Misiak

 

Additional services

 

Publications

Köhn M, Ihling C, Sinz A, Krohn K, Hüttelmaier S. The Y3** ncRNA promotes the 3' end processing of histone mRNAs. Genes Dev. 2015 Oct 1;29(19):1998-2003. doi: 10.1101/gad.266486.115. PubMed PMID: 26443846; PubMed Central PMCID: PMC4604341.

Braun J, Misiak D, Busch B, Krohn K, Hüttelmaier S. Rapid identification of regulatory microRNAs by miTRAP (miRNA trapping by RNA in vitro affinity purification). Nucleic Acids Res. 2014 Apr 1;42(8):e66. doi: 10.1093/nar/gku127. Epub 2014 Feb 7. PubMed PMID: 24510096; PubMed Central PMCID: PMC4005655.